Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925573.1_cds_XP_016473810.1_65899
CDS Infomation

[gene=LOC107795650] [db_xref=GeneID:107795650] [protein=low-temperature-induced cysteine proteinase-like] [protein_id=XP_016473810.1] [location=complement(join(53363..53458,53615..54064,54401..54541,54638..54873,57168..57654))] [gbkey=CDS]
Sequence

ATGGCAACTCATAGCTCCACTCTCACCATATCCATATCCCTACTTCTCCTCCTCTTCTTC
TTCTTCTTCTCCACCTTATCTTCCGCTTCCGACATGTCCATCTTAACCTACGACGAAAAC
CAACACTTTCGAACGGACGATGAAGTCATGTCCTTGTACGAGTCATGGCTACTCGAACAT
GGAAAATCGTACAACGCCTTAGACGAAAAAGACAAGCGGTTTCAGATCTTTAAAGATAAC
TTAAGATACATCGATGAACAAAACTCCGTTCCAAACAAGAGTTACAAGCTTGGTTTAACC
AAATTTGCTGATCTGACCAACGAGGAGTACAGGTCCATGTACTTAGGTACTAAGACCAGT
GATCGTCGCAGGTTGTTGAAAAACAAAAGCGATCGGTATCTTCCTAAAGTTGGGGATAGC
TTGCCGGACTCAGTTGATTGGAGAGAGAAAGGTGTTCTTGTTGGAGTTAAGGATCAAGGA
AGCTGTGGGAGCTGTTGGGCATTCTCTGCAATTGCTTCCGTTGAAGCAGTGAACTCGATA
GTCACCGGAGATGTGATTTCACTATCGGAGCAAGAACTGGTGGATTGTGATACTTCCTAC
AATGACGGCTGCAATGGCGGTCTTATGGACTATGCCTTTGATTTCATCATCAAAAATGGA
GGAATTGACACTGAGGAAGACTACCCTTACACAGGCCGTGATGGCAGATGTGACCAGTCA
AGGAAAAATGCCAAGGTTGTTACCATAGATGGGTATGAAGATGTTCCTGCAAATAATGAA
AAGGCACTGCAAAAGGCTGTTGCAAATCAACCTGTGAGCATTGCCATTGAAGCTGGTGGC
CACGACTTTCAACACTATGTATCGGGTATCTTTACTGGAAAATGTGGAACTGCAGTGGAC
CATGGCGTGGTTGCTGTTGGATATGGTAGTGAGAATGGTATGGATTATTGGATTATCAGG
AACTCTTGGGGTGCTTCCTGGGGAGAGAAAGGTTACCTTCGGGTTCAACGTAACGTTGCC
AGTTCTAAAGGTTTGTGTGGATTAGCCATAGAGCCTTCTTACCCAGTCAAGACAGGCGTA
AATCCCCCTAAACCTGGACCTTCTCCTCCATCTCCAATCAAGCCACCTACTCAGTGTGAT
GATTATGCTCAATGCCCCGAGGGTACCACTTGCTGTTGTGTCTTTGAATACTATAACTCC
TGCTTTTCTTGGGGATGTTGCCCTCTTGAAGGAGCCACTTGCTGTGAAGATCACTACAGT
TGTTGCCCACACGACTATCCTGTCTGCAATATTCGTGCAGGCACCTGCTCAATAAGCAAG
GACAACCCGCTGGGAGTGAAGGCAATGAAGCACATCCATGCCGAACCAATTGAGGCCTTC
ATAAATGGAGGAAGGAAGAGCAGTTCTTGA

Peptide Sequence

PEP ID

XP_016473810.1
PEP Infomation

PREDICTED: low-temperature-induced cysteine proteinase-like [Nicotiana tabacum]
Sequence

MATHSSTLTISISLLLLLFFFFFSTLSSASDMSILTYDENQHFRTDDEVMSLYESWLLEH
GKSYNALDEKDKRFQIFKDNLRYIDEQNSVPNKSYKLGLTKFADLTNEEYRSMYLGTKTS
DRRRLLKNKSDRYLPKVGDSLPDSVDWREKGVLVGVKDQGSCGSCWAFSAIASVEAVNSI
VTGDVISLSEQELVDCDTSYNDGCNGGLMDYAFDFIIKNGGIDTEEDYPYTGRDGRCDQS
RKNAKVVTIDGYEDVPANNEKALQKAVANQPVSIAIEAGGHDFQHYVSGIFTGKCGTAVD
HGVVAVGYGSENGMDYWIIRNSWGASWGEKGYLRVQRNVASSKGLCGLAIEPSYPVKTGV
NPPKPGPSPPSPIKPPTQCDDYAQCPEGTTCCCVFEYYNSCFSWGCCPLEGATCCEDHYS
CCPHDYPVCNIRAGTCSISKDNPLGVKAMKHIHAEPIEAFINGGRKSSS

Transcript Sequence

Gene sequence data has not been registered.